############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL plyranges ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'plyranges' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'plyranges' finding HTML links ... done add-nearest-distance html as_ranges html finding level-2 HTML links ... done compute_coverage html element-setops html filter-ranges html group_by-ranges html io-bam-read html io-bed-read html io-bed-write html io-bigwig-read html io-bigwig-write html io-gff-read html io-gff-write html io-wig-read html io-wig-write html mutate-ranges html n html n_distinct html overlap-joins html overscope_ranges html plyranges-package html ranges-anchor html ranges-arrange html ranges-bind html ranges-chop html ranges-class html ranges-construct html ranges-count-overlaps html ranges-deferred html ranges-disjoin html ranges-expand html ranges-filter-overlaps html ranges-flank html ranges-follow html ranges-info html ranges-interweave html ranges-names html ranges-nearest html ranges-overlaps-self html ranges-overlaps html ranges-pairs html ranges-precede html ranges-reduce html ranges-select html ranges-setops html ranges-setters html ranges-shift html ranges-summarise html ranges-tile html slice-ranges html stretch html tidyverse-reexports html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plyranges) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'TFBSTools' is missing or broken Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'VarCon' is missing or broken done