############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL motifbreakR ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'motifbreakR' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading See system.file("LICENSE", package="MotifDb") for use restrictions. Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'motifbreakR' Warning: replacing previous import 'S4Vectors::as.data.frame' by 'motifStack::as.data.frame' when loading 'motifbreakR' ** help *** installing help indices converting help for package 'motifbreakR' finding HTML links ... done calculatePvalue html finding level-2 HTML links ... done encodemotif html example.results html factorbook html hocomoco html homer html motifbreakR html motifbreakR_motif html plotMB html scoreAllWindows html snps.from.file html snps.from.rsid html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location See system.file("LICENSE", package="MotifDb") for use restrictions. Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'motifbreakR' Warning: replacing previous import 'S4Vectors::as.data.frame' by 'motifStack::as.data.frame' when loading 'motifbreakR' ** testing if installed package can be loaded from final location See system.file("LICENSE", package="MotifDb") for use restrictions. Warning: replacing previous import 'IRanges::windows' by 'grDevices::windows' when loading 'motifbreakR' Warning: replacing previous import 'S4Vectors::as.data.frame' by 'motifStack::as.data.frame' when loading 'motifbreakR' ** testing if installed package keeps a record of temporary installation path * DONE (motifbreakR) Making 'packages.html' ... done