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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL monaLisa
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'monaLisa' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'monaLisa'
    finding HTML links ... done
    annoSeqlogo                             html  
    bin                                     html  
    calcBinnedKmerEnr                       html  
    calcBinnedMotifEnrHomer                 html  
    calcBinnedMotifEnrR                     html  
    dot-calcKmerEnrichment                  html  
    dot-calcMotifEnrichment                 html  
    dot-calculateGCweight                   html  
    dot-checkDfValidity                     html  
    dot-checkIfSeqsAreEqualLength           html  
    dot-cons2matrix                         html  
    dot-defineBackground                    html  
    dot-filterSeqs                          html  
    dot-glmnetRandomizedLasso               html  
    dot-iterativeNormForKmers               html  
    dot-normForKmers                        html  
    dumpJaspar                              html  
    findHomer                               html  
    findMotifHits-methods                   html  
    getColsByBin                            html  
    getKmerFreq                             html  
    finding level-2 HTML links ... done

    getSetZeroBin                           html  
    homerToPFMatrixList                     html  
    monaLisa-package                        html  
    motifKmerSimilarity                     html  
    motifSimilarity                         html  
    parseHomerOutput                        html  
    plotBinDensity                          html  
    plotBinDiagnostics                      html  
    plotBinHist                             html  
    plotBinScatter                          html  
    plotMotifHeatmaps                       html  
    plotSelectionProb                       html  
    plotStabilityPaths                      html  
    prepareHomer                            html  
    randLassoStabSel                        html  
    sampleRandomRegions                     html  
    seqLogoGrob                             html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (monaLisa)
Making 'packages.html' ... done