############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf microRNA.buildbin-libdir && mkdir microRNA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=microRNA.buildbin-libdir microRNA_1.53.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'microRNA' ... ** using staged installation ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c longest_common_substring.cpp -o longest_common_substring.o longest_common_substring.cpp: In function 'SEXPREC* longest_common_substring(SEXP)': longest_common_substring.cpp:55:15: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and '__gnu_cxx::__alloc_traits, int>::value_type' {aka 'int'} [-Wsign-compare] if (i == len[index] - 1) { // ignore null termination character ~~^~~~~~~~~~~~~~~~~ C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o microRNA.dll tmp.def longest_common_substring.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR installing to D:/biocbuild/bbs-3.15-bioc/meat/microRNA.buildbin-libdir/00LOCK-microRNA/00new/microRNA/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'microRNA' finding HTML links ... done RNA2DNA html get_selfhyb_subseq html hsSeqs html hsTargets html matchSeeds html mmSeqs html mmTargets html s3utr html seedRegions html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'microRNA' as microRNA_1.53.0.zip * DONE (microRNA)