############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf mfa.buildbin-libdir && mkdir mfa.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=mfa.buildbin-libdir mfa_1.17.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'mfa' ... ** using staged installation ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c RcppExports.cpp -o RcppExports.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c gibbs.cpp -o gibbs.o C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o mfa.dll tmp.def RcppExports.o gibbs.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR installing to D:/biocbuild/bbs-3.15-bioc/meat/mfa.buildbin-libdir/00LOCK-mfa/00new/mfa/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'mfa' finding HTML links ... done calculate_chi html create_synthetic html cs_sigmoid html empirical_lambda html log_sum_exp html map_branch html mcmcify html mfa html plot_chi html plot_dropout_relationship html plot_mfa_autocorr html plot_mfa_trace html posterior html print.mfa html summary.mfa html to_ggmcmc html transient html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'mfa' as mfa_1.17.0.zip * DONE (mfa)