############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data metavizr ### ############################################################################## ############################################################################## * checking for file ‘metavizr/DESCRIPTION’ ... OK * preparing ‘metavizr’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘IntroToMetavizr.Rmd’ using rmarkdown Loading required package: metavizr Loading required package: metagenomeSeq Loading required package: Biobase Loading required package: BiocGenerics Attaching package: 'BiocGenerics' The following objects are masked from 'package:stats': IQR, mad, sd, var, xtabs The following objects are masked from 'package:base': Filter, Find, Map, Position, Reduce, anyDuplicated, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted, lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table, tapply, union, unique, unsplit, which.max, which.min Welcome to Bioconductor Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'. Loading required package: limma Attaching package: 'limma' The following object is masked from 'package:BiocGenerics': plotMA Loading required package: glmnet Loading required package: Matrix Loaded glmnet 4.1-4 Loading required package: RColorBrewer Loading required package: data.table Loading required package: digest Warning: replacing previous import 'GenomicFeatures::proteinToGenome' by 'ensembldb::proteinToGenome' when loading 'epivizrData' Loading required package: msd16s Quitting from lines 95-124 (IntroToMetavizr.Rmd) Error: processing vignette 'IntroToMetavizr.Rmd' failed with diagnostics: row dimension of design doesn't match column dimension of data object --- failed re-building ‘IntroToMetavizr.Rmd’ SUMMARY: processing the following file failed: ‘IntroToMetavizr.Rmd’ Error: Vignette re-building failed. Execution halted