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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL metabCombiner
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'metabCombiner' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c binByMZ.c -o binByMZ.o
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c findDuplicates.c -o findDuplicates.o
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c labelRows.c -o labelRows.o
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c metabCombiner_init.c -o metabCombiner_init.o
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c resolveRows.c -o resolveRows.o
resolveRows.c: In function 'resolveRows':
resolveRows.c:250:6: warning: variable 'sgnum' set but not used [-Wunused-but-set-variable]
  int sgnum = 0;
      ^~~~~
resolveRows.c:249:14: warning: unused variable 'filename' [-Wunused-variable]
  const char *filename = "output.txt";
              ^~~~~~~~
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c selectAnchors.c -o selectAnchors.o
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c write2file.c -o write2file.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o metabCombiner.dll tmp.def binByMZ.o findDuplicates.o labelRows.o metabCombiner_init.o resolveRows.o selectAnchors.o write2file.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-metabCombiner/00new/metabCombiner/libs/x64
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'metabCombiner'
    finding HTML links ... done
    Qdata                                   html  
    adductdata                              html  
    adjustData                              html  
    batchCombine                            html  
    calcScores                              html  
    calcScoresParam                         html  
    combinedTable                           html  
    combinerCheck                           html  
    crossValFit                             html  
    datasets                                html  
    detectFields                            html  
    evaluateParams                          html  
    featdata                                html  
    filterAnchors                           html  
    filterRT                                html  
    findDuplicates                          html  
    fit_gam                                 html  
    fit_loess                               html  
    fitgamParam                             html  
    fitloessParam                           html  
    getAnchors                              html  
    getCoefficients                         html  
    getData                                 html  
    getExtra                                html  
    getModel                                html  
    getSamples                              html  
    getStats                                html  
    iddata                                  html  
    identityAnchorSelection                 html  
    isCombinedTable                         html  
    isMetabCombiner                         html  
    isMetabData                             html  
    iterativeAnchorSelection                html  
    labelRows                               html  
    labelRowsParam                          html  
    metabBatches                            html  
    metabCombine                            html  
    metabCombiner-class                     html  
    metabCombiner                           html  
    metabData-class                         html  
    metabData                               html  
    mzGroup                                 html  
    mzdata                                  html  
    nonmatched                              html  
    objective                               html  
    plasma20                                html  
    plasma30                                html  
    plot_fit                                html  
    rtdata                                  html  
    scorePairs                              html  
    selectAnchors                           html  
    selectAnchorsParam                      html  
    write2file                              html  
    x                                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (metabCombiner)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'cTRAP' is missing or broken
 done