############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL gwascat ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'gwascat' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'gwascat' finding HTML links ... done bindcadd_snv html chklocs html ebicat_2020_04_30 html g17SM html getRsids-gwaswloc-method html getRsids html getTraits-gwaswloc-method html getTraits html get_cached_gwascat html gg17N html gr6.0_hg38 html gw6.rs_17 html gwascat_from_AHub html gwastagger html gwaswloc-class html gwcat_snapshot html gwcex2gviz html ldtagr html locon6 html locs4trait html low17 html makeCurrentGwascat html obo2graphNEL html process_gwas_dataframe html riskyAlleleCount html si.hs.37 html si.hs.38 html sub-gwaswloc-ANY-ANY-ANY-method html subsetByChromosome-gwaswloc-method html subsetByChromosome html subsetByTraits-gwaswloc-method html subsetByTraits html topTraits html traitsManh html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gwascat) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'iCNV' is missing or broken Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'Ularcirc' is missing or broken done