############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL geNetClassifier ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'geNetClassifier' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'geNetClassifier' finding HTML links ... done GeNetClassifierReturn-class html GeneralizationError-class html GenesNetwork-class html GenesRanking-class html calculateGenesRanking html externalValidation.probMatrix html externalValidation.stats html gClasses-methods html geNetClassifier-package html geNetClassifier html finding level-2 HTML links ... done geneSymbols html genesDetails-methods html getEdges-methods html getNodes-methods html getNumEdges-methods html getNumNodes-methods html getRanking-methods html getSubNetwork-methods html getTopRanking-methods html leukemiasClassifier html network2txt html numGenes-methods html numSignificantGenes-methods html overview-methods html plot.GeNetClassifierReturn html plot.GenesRanking html plotAssignments html plotDiscriminantPower html plotExpressionProfiles html plotNetwork html queryGeNetClassifier html querySummary html setProperties-methods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (geNetClassifier) Making 'packages.html' ... done