############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL flowGraph ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'flowGraph' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help Loading required namespace: flowGraph *** installing help indices converting help for package 'flowGraph' finding HTML links ... done cell_type_layers html extract_markers html fg_add_feature html fg_add_summary html fg_clean_phen html fg_clear_features html fg_clear_summary html fg_data_fca html fg_data_pos2 html fg_data_pos30 html fg_extract_phenotypes html fg_extract_raw html fg_extract_samples html fg_feat_cumsum html fg_feat_edge_specenr html fg_feat_mean_class html fg_feat_node_prop html fg_feat_node_specenr html fg_feat_prop_edge html fg_get_feature html fg_get_feature_desc html fg_get_feature_means html fg_get_graph html fg_get_markers html fg_get_meta html fg_get_summary html fg_get_summary_desc html fg_get_summary_index html fg_get_summary_tables html fg_gsub_ids html fg_gsub_markers html fg_load html fg_merge html fg_merge_samples html fg_plot html fg_plot_box html fg_plot_pVSdiff html fg_plot_qq html fg_replace_meta html fg_rm_feature html fg_rm_summary html fg_save html fg_save_plots html fg_set_layout html fg_summary html flowGraph-class html flowGraph html flowGraphSubset html flowGraphSubset_summary_adjust html flowGraphSubset_summary_pars html fpurrr_map html get_child html get_eprop html get_paren html get_phen_list html get_phen_meta html ggdf html loop_ind_f html meandiff html ms_create html ms_psig html plot_gr html set_layout_graph html summary_table html test_c html time_output html tstr html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flowGraph) Making 'packages.html' ... done