##############################################################################
##############################################################################
###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL fcoex
###
##############################################################################
##############################################################################


* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'fcoex' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB

Warning: replacing previous import 'Matrix::head' by 'utils::head' when loading 'fcoex'
in method for 'mod_ora' with signature '"fcoex"': no definition for class "fcoex"
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'Matrix::head' by 'utils::head' when loading 'fcoex'
in method for 'mod_ora' with signature '"fcoex"': no definition for class "fcoex"
** help
*** installing help indices
  converting help for package 'fcoex'
    finding HTML links ... done
    discretize                              html  
    dot-get_correlates                      html  
    fc                                      html  
    fcoex-class                             html  
    find_cbf_modules                        html  
    get_nets                                html  
    idents                                  html  
    mini_pbmc3k                             html  
    mod_colors                              html  
    mod_gene_num                            html  
    mod_names                               html  
    mod_ora                                 html  
    module_genes                            html  
    new_fcoex                               html  
    nmodules                                html  
    ora_data                                html  
    plot_one_interaction                    html  
    plot_ora                                html  
    plot_ora_single                         html  
    recluster                               html  
    save_plots                              html  
    show-fcoex-method                       html  
    show_net                                html  
    show_ora                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'Matrix::head' by 'utils::head' when loading 'fcoex'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'Matrix::head' by 'utils::head' when loading 'fcoex'
** testing if installed package keeps a record of temporary installation path
* DONE (fcoex)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'RTNduals' is missing or broken
 done