############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf diffcyt.buildbin-libdir && mkdir diffcyt.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=diffcyt.buildbin-libdir diffcyt_1.15.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'diffcyt' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'diffcyt' finding HTML links ... done calcCounts html finding level-2 HTML links ... done calcMedians html calcMediansByClusterMarker html calcMediansBySampleMarker html createContrast html createDesignMatrix html createFormula html diffcyt html generateClusters html plotHeatmap html prepareData html testDA_GLMM html testDA_edgeR html testDA_voom html testDS_LMM html testDS_limma html topClusters html topTable html transformData html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'diffcyt' as diffcyt_1.15.0.zip * DONE (diffcyt)