############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL consensusSeekeR ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'consensusSeekeR' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'consensusSeekeR' finding HTML links ... done A549_CTCF_MYJ_NarrowPeaks_partial html A549_CTCF_MYJ_Peaks_partial html A549_CTCF_MYN_NarrowPeaks_partial html A549_CTCF_MYN_Peaks_partial html A549_FOSL2_01_NarrowPeaks_partial html A549_FOSL2_01_Peaks_partial html A549_FOXA1_01_NarrowPeaks_partial html A549_FOXA1_01_Peaks_partial html A549_NR3C1_CFQ_NarrowPeaks_partial html A549_NR3C1_CFQ_Peaks_partial html A549_NR3C1_CFR_NarrowPeaks_partial html A549_NR3C1_CFR_Peaks_partial html A549_NR3C1_CFS_NarrowPeaks_partial html A549_NR3C1_CFS_Peaks_partial html NOrMAL_nucleosome_positions html NOrMAL_nucleosome_ranges html NucPosSimulator_nucleosome_positions html NucPosSimulator_nucleosome_ranges html PING_nucleosome_positions html PING_nucleosome_ranges html consensusSeekeR-package html findConsensusPeakRegions html findConsensusPeakRegionsForOneChrom html findConsensusPeakRegionsValidation html isInteger html readNarrowPeakFile html refineRegion html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (consensusSeekeR) Making 'packages.html' ... done