############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf coMethDMR.buildbin-libdir && mkdir coMethDMR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=coMethDMR.buildbin-libdir coMethDMR_0.99.12.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'coMethDMR' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Note: possible error in 'sesameDataCache("HM450")': unused argument ("HM450") Note: possible error in 'sesameDataCache("EPIC")': unused argument ("EPIC") ** help *** installing help indices converting help for package 'coMethDMR' finding HTML links ... done AnnotateResults html CloseBySingleRegion html CoMethAllRegions html CoMethSingleRegion html CpGsInfoAllRegions html CpGsInfoOneRegion html CreateOutputDF html CreateParallelWorkers html CreateRdrop html FindComethylatedRegions html GetCpGsInRegion html GetResiduals html MarkComethylatedCpGs html NameRegion html OrderCpGsByLocation html RegionsToRanges html SplitCpGDFbyRegion html WriteCloseByAllRegions html betaMatrix_ex1 html betaMatrix_ex2 html betaMatrix_ex3 html betaMatrix_ex4 html betasChr22_df html coMethDMR_setup html lmmTest html lmmTestAllRegions html pheno_df html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location snapshotDate(): 2022-03-01 ** testing if installed package can be loaded from final location snapshotDate(): 2022-03-01 ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'coMethDMR' as coMethDMR_0.99.12.zip * DONE (coMethDMR)