############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL clippda ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'clippda' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'clippda' finding HTML links ... done ZvaluescasesVcontrolsPlots html ZvaluesfrommultinomPlots html aclinicalProteomicsData-class html aclinicalProteomicsData-methods html betweensampleVariance-methods html betweensampleVariance html checkNo.replicates html clippda-package html f html fisherInformation-methods html fisherInformation html liverRawData html liver_pheno html liverdata html mostSimilarTwo html negativeIntensitiesCorrection html phenoDataFrame html pheno_urine html preProcRepeatedPeakData html proteomicsExprsData-methods html proteomicsExprsData html proteomicspData-methods html proteomicspData html replicateCorrelations-methods html replicateCorrelations html sampleClusteredData html sampleSize-methods html sampleSize html sampleSize3DscatterPlots html sampleSizeContourPlots html sampleSizeParameters-methods html sampleSizeParameters html sample_technicalVariance-methods html sample_technicalVariance html show-methods html spectrumFilter html ztwo html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clippda) Making 'packages.html' ... done