############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL chipenrich ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'chipenrich' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'chipenrich' finding HTML links ... done assign_peak_segments html assign_peaks html broadenrich html calc_peak_gene_overlap html chipenrich html chipenrich_package html filter_genesets html genome_to_organism html genome_to_orgdb html get_test_method html hybridenrich html load_peaks html num_peaks_per_gene html peaks2genes html plot_chipenrich_spline html plot_dist_to_tss html plot_gene_coverage html plot_polyenrich_spline html polyenrich html post_process_enrichments html postprocess_peak_grs html proxReg html read_bed html read_geneset html read_ldef html read_mappa html recode_peaks html reset_ncores_for_windows html setup_genesets html setup_locusdef html setup_mappa html supported_genesets html supported_genomes html supported_locusdefs html supported_methods html supported_read_lengths html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (chipenrich) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'mnem' is missing or broken done