############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ceRNAnetsim ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'ceRNAnetsim' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ceRNAnetsim' finding HTML links ... done TCGA_E9_A1N5_mirnanormal html TCGA_E9_A1N5_mirnatumor html TCGA_E9_A1N5_normal html TCGA_E9_A1N5_tumor html calc_perturbation html find_affected_nodes html find_iteration html find_node_perturbation html find_targeting_nodes html gene_knockdown html huge_example html midsamp html midsamp_new_counts html minsamp html mirtarbasegene html new_counts html normalize html prepare_rhs html prepare_rhs_once html priming_graph html simulate html simulate_vis html update_how html update_nodes html update_variables html vis_graph html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ceRNAnetsim) Making 'packages.html' ... done