############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL categoryCompare ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'categoryCompare' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Note: ... may be used in an incorrect context ** help *** installing help indices converting help for package 'categoryCompare' finding HTML links ... done GENccEnrichResult-class html finding level-2 HTML links ... done HyperGParamsCC-class html HyperGResultCC-class html breakEdges-methods html categoryCompare-package html ccCompare html ccCompareCollection-class html ccCompareGeneric-methods html ccCompareResult-class html ccData html ccEnrich html ccEnrichCollection-class html ccEnrichResult-class html ccGeneList-class html ccOptions-class html ccOutCyt-methods html ccSigList-class html cwReload-methods html cytOutData-methods html cytOutNodes-methods html fdr html getGeneSymbol html graphType-methods html hyperGTestCC html listNames html mergeLists-methods html mergedData-class html minCount html minNodes html pvalueType html resetColors-methods html show-methods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (categoryCompare) Making 'packages.html' ... done