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This page was generated on 2022-03-18 11:08:58 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for VplotR on riesling1


To the developers/maintainers of the VplotR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/VplotR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2061/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
VplotR 1.5.1  (landing page)
Jacques Serizay
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/VplotR
git_branch: master
git_last_commit: b1f537c
git_last_commit_date: 2021-11-21 01:03:46 -0400 (Sun, 21 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    ERROR  skippedskipped
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: VplotR
Version: 1.5.1
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL VplotR
StartedAt: 2022-03-17 15:50:09 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 15:51:49 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 99.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL VplotR
###
##############################################################################
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'VplotR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'GenomicRanges::subtract' by 'magrittr::subtract' when loading 'VplotR'
** help
*** installing help indices
  converting help for package 'VplotR'
    finding HTML links ... done
    ABF1_sacCer3                            html  
    ATAC_ce11_Serizay2020                   html  
    CTCF_hg38                               html  
    MNase_sacCer3_Henikoff2011              html  
    MNase_sacCer3_Henikoff2011_subset       html  
    REB1_sacCer3                            html  
    alignToTSS                              html  
    bam_test                                html  
    ce11_all_REs                            html  
    ce11_proms                              html  
    computeNucleosomeEnrichmentOverBackground
                                            html  
    computeVmat                             html  
    deconvolveBidirectionalPromoters        html  
    getCuts                                 html  
    getFragmentsDistribution                html  
    importPEBamFiles                        html  
    normalizeVmat                           html  
    nucleosomeEnrichment.GRanges            html  
    nucleosomeEnrichment                    html  
    nucleosomeEnrichment.Vmat               html  
    plotFootprint                           html  
    plotProfile                             html  
    plotVmat.GRanges                        html  
    plotVmat                                html  
    plotVmat.Vmat                           html  
    plotVmat.VmatList                       html  
    plotVmat.default                        html  
    plotVmat.list                           html  
    sampleGRanges.GRanges                   html  
    sampleGRanges                           html  
    shiftATACGranges                        html  
    shuffleVmat                             html  
    theme_ggplot2                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'GenomicRanges::subtract' by 'magrittr::subtract' when loading 'VplotR'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'GenomicRanges::subtract' by 'magrittr::subtract' when loading 'VplotR'
** testing if installed package keeps a record of temporary installation path
* DONE (VplotR)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'MDTS' is missing or broken
 done