############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL TimeSeriesExperiment ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'TimeSeriesExperiment' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'TimeSeriesExperiment' finding HTML links ... done TimeSeriesExperiment html finding level-2 HTML links ... done addLags html assignClusterDynamic html assignClusterStatic html clusterAssignment html clusterData html clusterTimeSeries html colData html collapseReplicates html collapsed-data html dataToTimeSeries html differentialExpression html dimensionReduction html dot-addLagsToTimeSeries html dot-imputeData html endoderm_small html filterFeatures html groups html makeTimeSeries html makeTimeSeriesExperimentFromExpressionSet html makeTimeSeriesExperimentFromSummarizedExperiment html meltMatrix html normalizeData html pathwayEnrichment html pipe html plotEnrichment html plotHeatmap html plotSamplePCA html plotTimeSeries html plotTimeSeriesClusters html plotTimeSeriesPCA html replicates html rowData html row_and_colnames html runPCA html show-methods html timeSeries html timepointDE html timepoints html trajectoryDE html varianceStabilization html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TimeSeriesExperiment) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'TOAST' is missing or broken done