############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL SummarizedExperiment ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'SummarizedExperiment' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SummarizedExperiment' finding HTML links ... done Assays-class html RangedSummarizedExperiment-class html finding level-2 HTML links ... done SummarizedExperiment-class html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-SummarizedExperiment/00new/SummarizedExperiment/help/assays.html coverage-methods html findOverlaps-methods html inter-range-methods html intra-range-methods html makeSummarizedExperimentFromDataFrame html makeSummarizedExperimentFromExpressionSet html makeSummarizedExperimentFromLoom html nearest-methods html readKallisto html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SummarizedExperiment) Making 'packages.html' ... done