############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL SplicingGraphs ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'SplicingGraphs' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs' Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs' ** help *** installing help indices converting help for package 'SplicingGraphs' finding HTML links ... done SplicingGraphs-class html SplicingGraphs-package html TSPCsg html assignReads html bubbles-methods html countReads-methods html plotTranscripts-methods html rsgedgesByGene-methods html sgedges-methods html sgedgesByGene-methods html sgraph-methods html toy_data html txpath-methods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs' Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs' ** testing if installed package can be loaded from final location Warning: replacing previous import 'IRanges::from' by 'Rgraphviz::from' when loading 'SplicingGraphs' Warning: replacing previous import 'IRanges::to' by 'Rgraphviz::to' when loading 'SplicingGraphs' ** testing if installed package keeps a record of temporary installation path * DONE (SplicingGraphs) Making 'packages.html' ... done