############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf Rtpca.buildbin-libdir && mkdir Rtpca.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=Rtpca.buildbin-libdir Rtpca_1.5.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'Rtpca' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Rtpca' finding HTML links ... done CommonFeatures-tpcaResult-method html ComplexAnnotation-tpcaResult-method html ComplexBackgroundDistributionList-tpcaResult-method html ComplexRocTable-tpcaResult-method html ContrastCondName-tpcaResult-method html ContrastDistMat-tpcaResult-method html ContrastList-tpcaResult-method html CtrlCondName-tpcaResult-method html DistMat-tpcaResult-method html DistMethod-tpcaResult-method html ObjList-tpcaResult-method html PPiAnnotation-tpcaResult-method html PPiRocTable-tpcaResult-method html PPiRocTableAnno-tpcaResult-method html SetCommonFeatures-tpcaResult-method html SetComplexAnnotation-tpcaResult-method html SetComplexBackgroundDistributionList-tpcaResult-method html SetComplexRocTable-tpcaResult-method html SetContrastCondName-tpcaResult-method html SetContrastDistMat-tpcaResult-method html SetCtrlCondName-tpcaResult-method html SetDiffTpcaResultTable-tpcaResult-method html SetDistMat-tpcaResult-method html SetDistMethod-tpcaResult-method html SetPPiRocTable-tpcaResult-method html SetPPiRocTableAnno-tpcaResult-method html SetSummaryMethod-tpcaResult-method html SetTpcaResultTable-tpcaResult-method html SummaryMethod-tpcaResult-method html createDistMat html diffTpcaResultTable-tpcaResult-method html ori_et_al_complex_ppis html ori_et_al_complexes_df html plotComplexRoc html plotDiffTpcaVolcano html plotPPiProfiles html plotPPiRoc html plotTpcaVolcano html runDiffTPCA html runTPCA html string_ppi_df html tpcaResult-class html tpcaResultTable-tpcaResult-method html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'Rtpca' as Rtpca_1.5.0.zip * DONE (Rtpca)