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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL Rhdf5lib
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'Rhdf5lib' ...
** using staged installation
untarring hdf5_headers_1.10.7.tar.gz ...
** libs
Warning: this package has a non-empty 'configure.win' file,
so building only the main architecture

mkdir -p "D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64" "D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include"
"D:/biocbuild/bbs-3.15-bioc/R/bin/x64/Rscript.exe" "../tools/copy_hdf5_files.R" "D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64" "D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include"
Copying libraries
Copying headers
Done
"D:/biocbuild/bbs-3.15-bioc/R/bin/x64/Rscript.exe" "../tools/winlibs.R" "D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64"
Downloading libcurl etc
Copying libraries
[1] "D:\\biocbuild\\bbs-3.15-bioc\\tmpdir\\RtmpQZ82N7/libcurl/libcurl-7.64.1/lib/x64/libcrypto.a"
[2] "D:\\biocbuild\\bbs-3.15-bioc\\tmpdir\\RtmpQZ82N7/libcurl/libcurl-7.64.1/lib/x64/libcurl.a"  
[3] "D:\\biocbuild\\bbs-3.15-bioc\\tmpdir\\RtmpQZ82N7/libcurl/libcurl-7.64.1/lib/x64/libssh2.a"  
[4] "D:\\biocbuild\\bbs-3.15-bioc\\tmpdir\\RtmpQZ82N7/libcurl/libcurl-7.64.1/lib/x64/libssl.a"   
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"  -I"D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/include"   -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c Rhdf5lib.c -o Rhdf5lib.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o Rhdf5lib.dll tmp.def Rhdf5lib.o D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64/libhdf5.a D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/lib/x64/libszip.a -lpsapi -lz -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-Rhdf5lib/00new/Rhdf5lib/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Rhdf5lib'
    finding HTML links ... done
    Rhdf5lib                                html  
    dot-getDynamicLinks                     html  
    dot-getSzipLoc                          html  
    getHdf5Version                          html  
    pkgconfig                               html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Rhdf5lib)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'SNPediaR' is missing or broken
 done