############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL REDseq ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'REDseq' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading No methods found in package 'IRanges' for requests: '%in%', 'rep.int' when loading 'REDseq' ** help *** installing help indices converting help for package 'REDseq' finding HTML links ... done REDseq-package html assignSeq2REsite html binom.test.REDseq html buildREmap html compareREDseq html distanceHistSeq2RE html example.REDseq html example.assignedREDseq html example.map html plotCutDistribution html searchPattern html summarizeByRE html summarizeBySeq html writeHits html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location No methods found in package 'IRanges' for requests: '%in%', 'rep.int' when loading 'REDseq' ** testing if installed package can be loaded from final location No methods found in package 'IRanges' for requests: '%in%', 'rep.int' when loading 'REDseq' ** testing if installed package keeps a record of temporary installation path * DONE (REDseq) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'ODER' is missing or broken done