############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf RCX.buildbin-libdir && mkdir RCX.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=RCX.buildbin-libdir RCX_0.99.2.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'RCX' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'RCX' finding HTML links ... done CartesianLayout html Convert-Names-and-Classes html CyGroups html CyHiddenAttributes html CyNetworkRelations html CySubNetworks html CyTableColumn html CyVisualProperties html CyVisualProperty html CyVisualPropertyDependencies html CyVisualPropertyMappings html CyVisualPropertyProperties html EdgeAttributes html Edges html Igraph html Meta-data html NetworkAttributes html NodeAttributes html Nodes html RCX-object html RCX html aspectClasses html checks html convert-data-types-and-values html convert2json html countElements html custom-print html dot-addAspectNameToJson html dot-addAttributeData html dot-aspectClass html dot-convertRawList html dot-createAttributeAspect html dot-createCyVpPorD html dot-errorCodes html dot-filterBy html dot-format html dot-infer html dot-json2RDataType html dot-jsonL html dot-jsonV html dot-log html dot-mergeAttributesAspect html dot-mergeIdAspect html dot-modClass html dot-pasteC html dot-renameDF html dot-stop html dot-summaryAspect html dot-transformListLength-set html dot-transformVLD html dot-validateAttributesAspect html dot-validateCyVisualPropertyPandD html dot_test html getCyVisualProperty html graphNEL html hasIds html idProperty html jsonToRCX html finding level-2 HTML links ... done markAttributeColumn html markRefColumn html maxId html rcxToJson html readCX html referredBy html refersTo html summary html toCX html updateCartesianLayout html updateCyGroups html updateCyHiddenAttributes html updateCyNetworkRelations html updateCySubNetworks html updateCyTableColumn html updateCyVisualProperties html updateCyVisualProperty html updateEdgeAttributes html updateEdges html updateMetaDataProperties html updateNetworkAttributes html updateNodeAttributes html updateNodes html validate html visualize html writeCX html writeHTML html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'RCX' as RCX_0.99.2.zip * DONE (RCX)