Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-03-18 11:08:18 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for Pigengene on riesling1


To the developers/maintainers of the Pigengene package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Pigengene.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1428/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Pigengene 1.21.38  (landing page)
Habil Zare
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/Pigengene
git_branch: master
git_last_commit: 8fd8fbe
git_last_commit_date: 2022-02-09 17:31:05 -0400 (Wed, 09 Feb 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: Pigengene
Version: 1.21.38
Command: rm -rf Pigengene.buildbin-libdir && mkdir Pigengene.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=Pigengene.buildbin-libdir Pigengene_1.21.38.tar.gz
StartedAt: 2022-03-17 21:28:25 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:29:48 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 83.1 seconds
RetCode: 0
Status:   OK  
PackageFile: Pigengene_1.21.38.zip
PackageFileSize: 3.023 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf Pigengene.buildbin-libdir && mkdir Pigengene.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=Pigengene.buildbin-libdir Pigengene_1.21.38.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'Pigengene' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Pigengene'
    finding HTML links ... done
    Pigengene-package                       html  
    aml                                     html  
    apply.filter                            html  
    balance                                 html  
    calculate.beta                          html  
    check.nas                               html  
    check.pigengene.input                   html  
    combine.networks                        html  
    compact.tree                            html  
    compute.pigengene                       html  
    dcor.matrix                             html  
    determine.modules                       html  
    draw.bn                                 html  
    eigengenes33                            html  
    gene.mapping                            html  
    get.enriched.pw                         html  
    get.fitted.leaf                         html  
    get.genes                               html  
    get.used.features                       html  
    learn.bn                                html  
    make.decision.tree                      html  
    make.filter                             html  
    mds                                     html  
    message.if                              html  
    module.heatmap                          html  
    one.step.pigengene                      html  
    pheatmap.type                           html  
    pigengene-class                         html  
    pigengene                               html  
REDIRECT:topic	 Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/meat/Pigengene.buildbin-libdir/00LOCK-Pigengene/00new/Pigengene/help/pigengene.html
    plot.pigengene                          html  
    preds.at                                html  
    project.eigen                           html  
    pvalues.manova                          html  
    save.if                                 html  
    wgcna.one.step                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Pigengene' as Pigengene_1.21.38.zip
* DONE (Pigengene)