############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf PanomiR.buildbin-libdir && mkdir PanomiR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=PanomiR.buildbin-libdir PanomiR_0.99.8.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'PanomiR' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'PanomiR' finding HTML links ... done aggInvCoverFn html aggInvFn html aggLogCoverFn html aggLogFn html alignToUniverse html clusterPlot html differentialPathwayAnalysis html enrichAllPairs html getDesignMatrix html getDiffExpTable html getResidual html gscExample html jackKnifeBase html linColumnFinder html mappingPathwaysClusters html methodProbBase html miRNAPathwayEnrichment html miniTestsPanomiR html msigdb_c2 html pCutCoverFn html pCutFn html path_gene_table html pathwayGeneTab html pathwaySummary html pcxnToNet html prioritizeMicroRNA html reportEnrichment html samplingDataBase html sumlogCoverFn html sumlogFn html sumzCoverFn html sumzFn html tableFromGSC html targetScan_03 html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'PanomiR' as PanomiR_0.99.8.zip * DONE (PanomiR)