############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf OmaDB.buildbin-libdir && mkdir OmaDB.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=OmaDB.buildbin-libdir OmaDB_2.11.1.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'OmaDB' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'OmaDB' finding HTML links ... done OmaDB-deprecated html OmaDB-package html annotateSequence html cash-.omadb_obj html formatTopGO html getAnnotation-deprecated html getAttribute html getData-deprecated html getGenome html getGenomeAlignment-deprecated html getGenomePairs html getHOG html getLocus html getOMAGroup html getObjectAttributes html getProtein html getTaxonomy html getTopGO html getTree html getVersion html getXref-deprecated html group html hog html mapSequence html orthologs html pairs html protein html resolveURL html searchProtein html sequence_annotation html sequence_map html setAPI html taxonomy html xref html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'OmaDB' as OmaDB_2.11.1.zip * DONE (OmaDB)