############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf NanoTube.buildbin-libdir && mkdir NanoTube.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=NanoTube.buildbin-libdir NanoTube_1.1.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'NanoTube' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'NanoTube' finding HTML links ... done ExamplePathways html ExampleResults html NanoTube html deVolcano html fgseaPostprocessing html fgseaPostprocessingXLSX html fgseaToLEdge html gm_mean html groupFGSEA html groupedGSEAtoStackedReport html limmaToFGSEA html makeDiffExprFile html makeFGSEAmasterTable html makeNanoStringSetFromEset html nanostringPCA html negativeQC html normalize_housekeeping html normalize_pos_controls html nsdiffToFGSEA html positiveQC html processNanostringData html read_cpdb_sourceDBs html read_cpdb_tab html read_merge_rcc html read_rcc html read_sampleData html remove_background html runLimmaAnalysis html unzip_dirs html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'NanoTube' as NanoTube_1.1.0.zip * DONE (NanoTube)