############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf NanoStringQCPro.buildbin-libdir && mkdir NanoStringQCPro.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=NanoStringQCPro.buildbin-libdir NanoStringQCPro_1.27.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'NanoStringQCPro' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'NanoStringQCPro' finding HTML links ... done NanoStringQCPro html RccSet-class html finding level-2 HTML links ... done RccSet html addCodesetAnnotation html addQCFlags html allSumPlot html assessHousekeeping html bdPlot html buildCodesetAnnotation html checkRccSet html colByCovar html colByFun html contentNorm html copyRccSet html countsInBlankSamples_verticalPlot html ctrlsOverviewPlot html ctrlsZprimePlot html cutoffByMMAD html cutoffByVar html dCoVar html densityPlot html example_rccSet html flagSamplesCount html flagSamplesCtrl html flagSamplesTech html fovPlot html geneClustering html getBackground html getBlankLabel html getSpikeInInput html iqrPlot html lodAssess html lodPlot html makeQCReport html myCols html nSolverBackground html nSolverCsv.to.pdata_fdata_adata html negCtrlsByLane html negCtrlsByLane_verticalPlot html negCtrlsPairs html negCtrlsPlot html newRccSet html panelCor html pcaPlot html pdata_fdata_adata.to.rccSet html posCtrlNorm html posNormFactPlot html posR2Plot html posRatioPlot html posSlopePlot html posSumVsAllSumPlot html preprocRccSet html presAbsCall html previewPNG html rccFiles.to.pdata_fdata_adata html readCdrDesignData html readRcc html readRccBatch html readRccCollectorToolExport html readRlf html sampleClustering html scatterPair html subtractBackground html zfacFun html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'NanoStringQCPro' as NanoStringQCPro_1.27.0.zip * DONE (NanoStringQCPro)