############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ModCon ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'ModCon' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ModCon' finding HTML links ... done Codons html ModCon html calculateHZEIint html calculateMaxEntScanScore html cds html changeSequenceHZEI html createCodonMatrix html createFilialSequencePopulation html decreaseGTsiteStrength html degradeSAs html degradeSDs html generateRandomCodonsPerAA html getOverlappingVectorsFromVector html hbg html hex html increaseGTsiteStrength html mutatePopulation html recombineTwoSequences html selectBestAndMean html selectMatingIndividuals html slidingWindowHZEImanipulation html startModConApp html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ModCon) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'parody' is missing or broken done