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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL MIRA
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'MIRA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MIRA'
    finding HTML links ... done
    BSBinAggregate                          html  
    BSreadBiSeq                             html  
    MIRA                                    html  
    SummarizedExperimentToDataTable         html  
    addMethPropCol                          html  
    aggregateMethyl                         html  
    bigBinDT1                               html  
    bigBinDT2                               html  
    binRegion                               html  
    bsseqToDataTable                        html  
    calcMIRAScore                           html  
    exampleAnnoDT1                          html  
    exampleAnnoDT2                          html  
    exampleBSDT                             html  
    exampleBSseqObj                         html  
    exampleBins                             html  
    exampleRegionSet                        html  
    plotMIRAProfiles                        html  
    plotMIRAScores                          html  
    rbindNamedList                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MIRA)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'trena' is missing or broken
 done