############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL MADSEQ ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'MADSEQ' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'MADSEQ' finding HTML links ... done MADSEQ-package html MadSeq html aneuploidy_chr18 html deltaBIC html normalizeCoverage html finding level-2 HTML links ... done plotFraction html plotMadSeq html plotMixture html posterior html prepareCoverageGC html prepareHetero html runMadSeq html summary-method html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MADSEQ) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'seqCAT' is missing or broken done