############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL ITALICS ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'ITALICS' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ITALICS' finding HTML links ... done GLAD.GLAD html ITALICSNew html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-ITALICS/00new/ITALICS/help/Italics.html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-ITALICS/00new/ITALICS/help/italics.html ITALICSTrain html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-ITALICS/00new/ITALICS/help/trainItalics.html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-ITALICS/00new/ITALICS/help/trainitalics.html Model.GetConfDat html Model.GetCorrection html Model.GetEffet html Model.GetModel html Model.GetResidu html New.AddInfo html New.fromQuartetToSnp html New.fromSnpToQuartet html New.getQuartet html New.getSnpInfo html New.readQuartetCopyNb html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ITALICS) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'PoTRA' is missing or broken done