Sehyun Oh
| Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022) |
| git_url: https://git.bioconductor.org/packages/GenomicSuperSignature |
| git_branch: master |
| git_last_commit: ca5156b |
| git_last_commit_date: 2022-03-09 16:51:47 -0400 (Wed, 09 Mar 2022) |
| Back to Multiple platform build/check report for BioC 3.15 |
|
This page was generated on 2022-03-18 11:07:37 -0400 (Fri, 18 Mar 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" | 4334 |
| riesling1 | Windows Server 2019 Standard | x64 | R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" | 4097 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" | 4083 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" | 4134 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the GenomicSuperSignature package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GenomicSuperSignature.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 760/2090 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GenomicSuperSignature 1.3.6 (landing page) Sehyun Oh
| nebbiolo1 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: GenomicSuperSignature |
| Version: 1.3.6 |
| Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL GenomicSuperSignature |
| StartedAt: 2022-03-17 16:02:55 -0400 (Thu, 17 Mar 2022) |
| EndedAt: 2022-03-17 16:04:08 -0400 (Thu, 17 Mar 2022) |
| EllapsedTime: 73.4 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL GenomicSuperSignature
###
##############################################################################
##############################################################################
* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'GenomicSuperSignature' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GenomicSuperSignature'
finding HTML links ... done
GenomicSignatures-class html
GenomicSignatures-methods html
PCAGenomicSignatures-class html
PCAGenomicSignatures-methods html
PCAGenomicSignatures html
PCinRAV html
annotatePC html
annotateRAV html
availableRAVmodel html
buildAvgLoading html
calculateScore html
dot-RAVName html
dot-calculateSilhouetteWidth html
dot-loadingCor html
drawWordcloud html
droplist html
extractPC html
filterList html
findKeywordInRAV html
findSignature html
findStudiesInCluster html
getModel html
finding level-2 HTML links ... done
Rd warning: D:/biocbuild/bbs-3.15-bioc/meat/GenomicSuperSignature/man/getModel.Rd:19: missing link 'availableRAVmodel()'
getRAVInfo html
getStudyInfo html
heatmapTable html
makeGeneList html
meshTable html
miniAllZ html
miniRAVmodel html
miniTCGA html
msigdb_gsea html
plotAnnotatedPCA html
plotValidate html
res_hcut html
rmNaInf html
rowNorm html
run_gsea html
sampleScoreHeatmap html
subsetEnrichedPathways html
subsetGSEA html
validate html
validatedSignatures html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (GenomicSuperSignature)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
DESCRIPTION file of package 'genomicInstability' is missing or broken
done