############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL GenomicFeatures ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'GenomicFeatures' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GenomicFeatures' finding HTML links ... done FeatureDb-class html finding level-2 HTML links ... done TxDb-class html as-format-methods html coordinate-mapping-methods html coverageByTranscript html disjointExons html exonicParts html extractTranscriptSeqs html extractUpstreamSeqs html features html getPromoterSeq-methods html id2name html makeFeatureDbFromUCSC html makeTxDb html makeTxDbFromBiomart html makeTxDbFromEnsembl html makeTxDbFromGFF html makeTxDbFromGRanges html makeTxDbFromUCSC html makeTxDbPackage html mapIdsToRanges html mapRangesToIds html microRNAs html nearest-methods html proteinToGenome html select-methods html transcriptLengths html transcriptLocs2refLocs html transcripts html transcriptsBy html transcriptsByOverlaps html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GenomicFeatures) Making 'packages.html' ... done