############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL GSEABase ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'GSEABase' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GSEABase' finding HTML links ... done CollectionType-class html CollectionType-constructors html GSEABase-package html GeneColorSet-class html GeneColorSet-methods html GeneIdentifierType-class html GeneIdentifierType-constructors html GeneSet-class html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-GSEABase/00new/GSEABase/help/collectionType.html GeneSet-methods html GeneSetCollection-class html GeneSetCollection-methods html OBOCollection-class html details-methods html getOBOCollection html getObjects html goSlim-methods html incidence-methods html mapIdentifiers-methods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GSEABase) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'RSVSim' is missing or broken done