############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf GPA.buildbin-libdir && mkdir GPA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=GPA.buildbin-libdir GPA_1.7.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'GPA' ... ** using staged installation ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c cppEM.cpp -o cppEM.o C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o GPA.dll tmp.def cppEM.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR installing to D:/biocbuild/bbs-3.15-bioc/meat/GPA.buildbin-libdir/00LOCK-GPA/00new/GPA/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for 'cov' in package 'GPA' ** help *** installing help indices converting help for package 'GPA' finding HTML links ... done GPA-class html GPA-internal html GPA-package html GPA html aTest html assoc html fitAll html pTest html shinyGPA html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'GPA' as GPA_1.7.0.zip * DONE (GPA)