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This page was generated on 2022-10-17 13:21:33 -0400 (Mon, 17 Oct 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.5 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4386
palomino3Windows Server 2022 Datacenterx644.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" 4138
merida1macOS 10.14.6 Mojavex86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4205
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for GBScleanR on palomino3


To the developers/maintainers of the GBScleanR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GBScleanR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 723/2140HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GBScleanR 1.0.5  (landing page)
Tomoyuki Furuta
Snapshot Date: 2022-10-16 13:55:18 -0400 (Sun, 16 Oct 2022)
git_url: https://git.bioconductor.org/packages/GBScleanR
git_branch: RELEASE_3_15
git_last_commit: 6388d36
git_last_commit_date: 2022-09-07 07:11:14 -0400 (Wed, 07 Sep 2022)
nebbiolo1Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    ERROR  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: GBScleanR
Version: 1.0.5
Command: rm -rf GBScleanR.buildbin-libdir && mkdir GBScleanR.buildbin-libdir && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=GBScleanR.buildbin-libdir GBScleanR_1.0.5.tar.gz
StartedAt: 2022-10-17 05:49:58 -0400 (Mon, 17 Oct 2022)
EndedAt: 2022-10-17 05:51:08 -0400 (Mon, 17 Oct 2022)
EllapsedTime: 70.3 seconds
RetCode: 0
Status:   OK  
PackageFile: GBScleanR_1.0.5.zip
PackageFileSize: 1.609 MiB

Command output

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###
### Running command:
###
###   rm -rf GBScleanR.buildbin-libdir && mkdir GBScleanR.buildbin-libdir && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=GBScleanR.buildbin-libdir GBScleanR_1.0.5.tar.gz
###
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* installing *source* package 'GBScleanR' ...
** using staged installation
** libs
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.15-bioc/R/library/RcppParallel/include'   -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"  -DRCPP_PARALLEL_USE_TBB=1   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c GBSR_HMM.cpp -o GBSR_HMM.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.15-bioc/R/library/RcppParallel/include'   -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"  -DRCPP_PARALLEL_USE_TBB=1   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c GBSR_stats.cpp -o GBSR_stats.o
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I'F:/biocbuild/bbs-3.15-bioc/R/library/RcppParallel/include'   -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"  -DRCPP_PARALLEL_USE_TBB=1   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -shared -s -static-libgcc -o GBScleanR.dll tmp.def GBSR_HMM.o GBSR_stats.o RcppExports.o -LF:/biocbuild/bbs-3.15-bioc/R/library/RcppParallel/lib/x64 -ltbb -ltbbmalloc -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.15-bioc/meat/GBScleanR.buildbin-libdir/00LOCK-GBScleanR/00new/GBScleanR/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'GBScleanR' as GBScleanR_1.0.5.zip
* DONE (GBScleanR)