############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL FindIT2 ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'FindIT2' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'FindIT2' finding HTML links ... done ATAC_normCount html RNADiff_LEC2_GR html RNA_normCount html TF_target_database html calcRP_TFHit html calcRP_coverage html calcRP_region html enhancerPromoterCor html findIT_MARA html findIT_TFHit html findIT_TTPair html findIT_enrichFisher html findIT_enrichWilcox html findIT_regionRP html getAssocPairNumber html integrate_ChIP_RNA html integrate_replicates html jaccard_findIT_TTpair html jaccard_findIT_enrichFisher html loadPeakFile html mm_geneBound html mm_geneScan html mm_nearestGene html peakGeneCor html plot_annoDistance html plot_peakGeneAlias_summary html plot_peakGeneCor html test_featureSet html test_geneSet html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (FindIT2) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'SGSeq' is missing or broken done