############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf EGAD.buildbin-libdir && mkdir EGAD.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=EGAD.buildbin-libdir EGAD_1.23.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'EGAD' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'EGAD' finding HTML links ... done GO.human html GO.mouse html GO.voc html assortativity html atrr.human html attr.mouse html auc_multifunc html auprc html auroc_analytic html biogrid html build_binary_network html build_coexp_GEOID html build_coexp_expressionSet html build_coexp_network html build_semantic_similarity_network html build_weighted_network html calculate_multifunc html conv_smoother html example_annotations html example_binary_network html example_coexpression html example_neighbor_voting html extend_network html filter_network html filter_network_cols html filter_network_rows html filter_orthologs html fmeasure html genes html get_auc html get_biogrid html get_counts html get_density html get_expression_data_gemma html get_expression_matrix_from_GEO html get_phenocarta html get_prc html get_roc html make_annotations html make_gene_network html make_genelist html make_transparent html neighbor_voting html node_degree html ortho html pheno html plot_densities html plot_density_compare html plot_distribution html plot_network_heatmap html plot_prc html plot_roc html plot_roc_overlay html plot_value_compare html predictions html repmat html run_GBA html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'EGAD' as EGAD_1.23.0.zip * DONE (EGAD)