############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL DOSE ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'DOSE' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'DOSE' finding HTML links ... done DOSE-package html DataSet html EXTID2NAME html GSEA_internal html clusterSim html compareClusterResult-class html computeIC html doSim html enrichDGN html enrichDGNv html enrichDO html enrichNCG html enrichResult-class html enricher_internal html gene2DO html geneID html geneInCategory html geneSim html gseDGN html gseDO html gseNCG html gseaResult-class html gsfilter html mclusterSim html parse_ratio html rebuildAnnoData html reexports html setReadable html show-methods html simplot html summary-methods html theme_dose html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DOSE) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'Rcpi' is missing or broken Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'tscR' is missing or broken done