############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r ChromSCape -R && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data ChromSCape ### ############################################################################## ############################################################################## * checking for file 'ChromSCape/DESCRIPTION' ... OK * preparing 'ChromSCape': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'PairedTag_Zhu_H3K4me1.Rmd' using rmarkdown Quitting from lines 75-79 (PairedTag_Zhu_H3K4me1.Rmd) Error: processing vignette 'PairedTag_Zhu_H3K4me1.Rmd' failed with diagnostics: Failed to open /media/pprompsy/Depic_bioinfo_1/InstitutCurie/Documents/Data/ChromSCape_Data/ChromSCape_1.5.22/ChromSCape_analyses//GSE152020_PairedTag_Zhu_2021_H3K4me1/Filtering_Normalize_Reduce/GSE152020_PairedTag_Zhu_2021_H3K4me1_500_200000_99_uncorrected.qs. Check file path. --- failed re-building 'PairedTag_Zhu_H3K4me1.Rmd' --- re-building 'vignette.Rmd' using rmarkdown --- finished re-building 'vignette.Rmd' SUMMARY: processing the following file failed: 'PairedTag_Zhu_H3K4me1.Rmd' Error: Vignette re-building failed. Execution halted