############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf CSAR.buildbin-libdir && mkdir CSAR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=CSAR.buildbin-libdir CSAR_1.47.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'CSAR' ... ** using staged installation ** libs "C:/rtools40/mingw64/bin/"gcc -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition -c CSAR.c -o CSAR.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o CSAR.dll tmp.def CSAR.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR installing to D:/biocbuild/bbs-3.15-bioc/meat/CSAR.buildbin-libdir/00LOCK-CSAR/00new/CSAR/libs/x64 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CSAR' finding HTML links ... done CSAR-package html ChIPseqScore html distance2Genes html genesWithPeaks html getPermutatedWinScores html getThreshold html loadMappedReads html mappedReads2Nhits html permutatedWinScores html sampleSEP3_test html score2wig html sigWin html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'CSAR' as CSAR_1.47.0.zip * DONE (CSAR)