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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL COTAN
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'COTAN' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'COTAN'
    finding HTML links ... done
    ERCC.cotan                              html  
    ERCCraw                                 html  
    add.row.to.meta                         html  
    automatic.COTAN.object.creation         html  
    clean                                   html  
    cotan_analysis                          html  
    drop.genes.cells                        html  
    fun_linear                              html  
    get.GDI                                 html  
    get.a                                   html  
    get.cell.number                         html  
    get.cell.size                           html  
    get.coex                                html  
    get.constitutive.genes                  html  
    get.expected.ct                         html  
    get.gene.coexpression.space             html  
    get.genes                               html  
    get.lambda                              html  
    get.metadata                            html  
    get.normdata                            html  
    get.nu                                  html  
    get.observed.ct                         html  
    get.pval                                html  
    get.rawdata                             html  
    initRaw                                 html  
    plot_GDI                                html  
    plot_general.heatmap                    html  
    plot_heatmap                            html  
    raw.dataset                             html  
    scCOTAN-class                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (COTAN)
Making 'packages.html' ... done