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### Running command:
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###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL CARNIVAL
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'CARNIVAL' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CARNIVAL'
    finding HTML links ... done
    addPerturbationNodes                    html  
    checkCarnivalOptions                    html  
    checkData                               html  
    checkOptionsValidity                    html  
    checkPriorKnowledgeNetwork              html  
    createInternalDataRepresentation        html  
    defaultCbcSolveCarnivalOptions          html  
    defaultCplexCarnivalOptions             html  
    defaultCplexSpecificOptions             html  
    defaultLpSolveCarnivalOptions           html  
    generateLpFileCarnival                  html  
    getOptionsList                          html  
    getSupportedSolvers                     html  
    getSupportedSolversFunctions            html  
    isInputValidCarnival                    html  
    parseCplexLog                           html  
    prepareForCarnivalRun                   html  
    preprocessPriorKnowledgeNetwork         html  
    processSolution                         html  
    readOptions                             html  
    runCARNIVAL                             html  
    runFromLpCarnival                       html  
    runInverseCarnival                      html  
    runVanillaCarnival                      html  
    sendTaskToSolver                        html  
    setCarnivalOptions                      html  
    solveCarnival                           html  
    solveCarnivalFromLp                     html  
    solveWithCbc                            html  
    suggestedCbcSpecificOptions             html  
    suggestedCplexSpecificOptions           html  
    writeParsedData                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CARNIVAL)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'msqrob2' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'omicRexposome' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'scp' is missing or broken
 done