############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL BloodGen3Module ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'BloodGen3Module' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'SummarizedExperiment::rowRanges' by 'matrixStats::rowRanges' when loading 'BloodGen3Module' Warning: replacing previous import 'SummarizedExperiment::start' by 'stats::start' when loading 'BloodGen3Module' Warning: replacing previous import 'SummarizedExperiment::end' by 'stats::end' when loading 'BloodGen3Module' Warning: replacing previous import 'matrixStats::rowRanges' by 'SummarizedExperiment::rowRanges' when loading 'BloodGen3Module' ** help *** installing help indices converting help for package 'BloodGen3Module' finding HTML links ... done Gen3_ann html Groupcomparison html Groupcomparisonlimma html Individualcomparison html Module_listGen3 html color html fingerprintplot html fold_change html gridplot html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'SummarizedExperiment::rowRanges' by 'matrixStats::rowRanges' when loading 'BloodGen3Module' Warning: replacing previous import 'SummarizedExperiment::start' by 'stats::start' when loading 'BloodGen3Module' Warning: replacing previous import 'SummarizedExperiment::end' by 'stats::end' when loading 'BloodGen3Module' Warning: replacing previous import 'matrixStats::rowRanges' by 'SummarizedExperiment::rowRanges' when loading 'BloodGen3Module' ** testing if installed package can be loaded from final location Warning: replacing previous import 'SummarizedExperiment::rowRanges' by 'matrixStats::rowRanges' when loading 'BloodGen3Module' Warning: replacing previous import 'SummarizedExperiment::start' by 'stats::start' when loading 'BloodGen3Module' Warning: replacing previous import 'SummarizedExperiment::end' by 'stats::end' when loading 'BloodGen3Module' Warning: replacing previous import 'matrixStats::rowRanges' by 'SummarizedExperiment::rowRanges' when loading 'BloodGen3Module' ** testing if installed package keeps a record of temporary installation path * DONE (BloodGen3Module) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'satuRn' is missing or broken done