############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/trio_3.32.0.tar.gz && rm -rf trio.buildbin-libdir && mkdir trio.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=trio.buildbin-libdir trio_3.32.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL trio_3.32.0.zip && rm trio_3.32.0.tar.gz trio_3.32.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 721k 100 721k 0 0 877k 0 --:--:-- --:--:-- --:--:-- 878k install for i386 * installing *source* package 'trio' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'trio' finding HTML links ... done allelicTDT html colEMlrt html colGxE html colGxGPerms html colPOlrt html colTDTmaxTest html colTDTsam html findLDblocks html getLD html getMatPseudo html lrControl html ped2geno html plot.LDblocks html plot.getLD html plot.trioLR html poly4root html print.colGxE html print.trioFS html print.trioLR html probTDT html read.pedfile html removeSNPs html scoreTDT html tdt html tdtGxG html trio.check html trio.data html trio.permTest html trio.power html trio.prepare html trio.sim html trioFS html trioLR html vcf2geno html ** building package indices ** installing vignettes 'trio.Rnw' ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'trio' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'trio' as trio_3.32.0.zip * DONE (trio) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'trio' successfully unpacked and MD5 sums checked