############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/topGO_2.46.0.tar.gz && rm -rf topGO.buildbin-libdir && mkdir topGO.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=topGO.buildbin-libdir topGO_2.46.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL topGO_2.46.0.zip && rm topGO_2.46.0.tar.gz topGO_2.46.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 424k 100 424k 0 0 813k 0 --:--:-- --:--:-- --:--:-- 815k install for i386 * installing *source* package 'topGO' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'topGO' finding HTML links ... done GOTests html GOdata html annFUN html classicCount-class html classicExpr-class html classicScore-class html dagFunctions html diagnosticMethods html elimCount-class html elimExpr-class html elimScore-class html geneList html getPvalues html getSigGroups html groupGOTerms html groupStats-class html inducedGraph html parentChild-class html printGraph-methods html topGO-package html topGOdata-class html topGOresult-class html weightCount-class html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built. ** testing if installed package can be loaded from final location groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built. ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'topGO' ... ** testing if installed package can be loaded groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built. * MD5 sums packaged installation of 'topGO' as topGO_2.46.0.zip * DONE (topGO) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'topGO' successfully unpacked and MD5 sums checked